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* Updated example of Smol Docling usage
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Added captions for the images for SmolDocling assembly code, improved provenance definition for all elements
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Update minimal smoldocling example
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Fix repo id
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Cleaned up unnecessary logging
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* More elegant solution in removing the input prompt
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* removed minimal_smol_docling example from CI checks
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Removed special html code wrapping when exporting to docling document, cleaned up comments
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Addressing PR comments, added enabled property to SmolDocling, and related VLM pipeline option, few other minor things
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Moved keep_backend = True to vlm pipeline
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* removed pipeline_options.generate_table_images from vlm_pipeline (deprecated in the pipelines)
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Added example on how to get original predicted doctags in minimal_smol_docling
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* removing changes from base_pipeline
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Replaced remaining strings to appropriate enums
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Updated poetry.lock
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* re-built poetry.lock
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
* Generalize and refactor VLM pipeline and models
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Rename example
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Move imports
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Expose control over using flash_attention_2
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Fix VLM example exclusion in CI
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Add back device_map and accelerate
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Make drawing code resilient against bad bboxes
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* chore: clean up code and comments
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* chore: more cleanup
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* chore: fix leftover .to(device)
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* fix: add proper table provenance
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
---------
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
Signed-off-by: Maksym Lysak <mly@zurich.ibm.com>
Co-authored-by: Maksym Lysak <mly@zurich.ibm.com>
* test: avoid testing exact JSON
Avoid testing exact JSON output in html and xml backends.
Reuse the JSON verify helper function among backend test files.
Improve type annotations in html backend.
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
* Update tests/test_backend_patent_uspto.py
Co-authored-by: Michele Dolfi <97102151+dolfim-ibm@users.noreply.github.com>
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
---------
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
Co-authored-by: Michele Dolfi <97102151+dolfim-ibm@users.noreply.github.com>
* refactor: upgrade BeautifulSoup4 with type hints
Upgrade dependency library BeautifulSoup4 to 4.13.3 (with type hints).
Refactor backends using BeautifulSoup4 to comply with type hints.
Apply style simplifications and improvements for consistency.
Remove variables and functions that are never used.
Remove code duplication between backends for parsing HTML tables.
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
* build: allow beautifulsoup4 version 4.12.3
Allow older version of beautifulsoup4 and ensure compatibility.
Update library dependencies.
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
---------
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
* chore(xml-jats): separate authors and affiliations
In XML PubMed (JATS) backend, convert authors and affiliations as they
are typically rendered on PDFs.
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
* fix(xml-jats): replace new line character by a space
Instead of removing new line character from text, replace it by a space character.
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
* feat(xml-jats): improve existing parser and extend features
Partially support lists, respect reading order, parse more sections, support equations, better text formatting.
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
* chore(xml-jats): rename PubMed objects to JATS
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
---------
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
* allow the artifacts_path to be defined as ENV
Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
* add check if artifacts_path exists and is dir
Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
---------
Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
* feat: Pass predicted page-headers and page-footers through to DoclingDocument furniture
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* chore: Update all test GT
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* fix: update all test cases
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* fix: update all test cases again
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Update lock
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
* Update lock to final docling-core
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
---------
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
